STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_2934Lead, cadmium, zinc and mercury transporting ATPase. (131 aa)    
Predicted Functional Partners:
AKJ08_2933
Lead, cadmium, zinc and mercury transporting ATPase.
   
 0.994
AKJ08_3369
Type cbb3 cytochrome oxidase biogenesis protein CcoI.
 
     0.711
AKJ08_2935
Acetyltransferase, GNAT family.
       0.631
AKJ08_2368
Cu(I)-responsive transcriptional regulator.
  
 0.598
AKJ08_2936
Multidrug resistance transporter, Bcr/CflA family.
       0.541
AKJ08_3371
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
     
 0.530
AKJ08_2932
Threonine dehydrogenase.
  
    0.512
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.