STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flhAFlagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (686 aa)    
Predicted Functional Partners:
AKJ08_3397
Flagellar biosynthesis protein FlhB.
 
 0.999
AKJ08_3398
Flagellar biosynthesis protein FliR.
 
  
 0.994
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.993
AKJ08_3402
Flagellar motor switch protein FliN.
 
  
 0.992
AKJ08_3403
Flagellar motor switch protein FliM.
 
  
 0.992
AKJ08_3395
Flagellar biosynthesis protein FlhF.
 
  
 0.987
AKJ08_3412
Flagellum-specific ATP synthase FliI.
 
 
 0.987
AKJ08_3406
Flagellar motor rotation protein MotA.
 
  
 0.986
AKJ08_3414
Flagellar motor switch protein FliG.
 
  
 0.986
AKJ08_3415
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.984
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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