STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ08_3526Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1037 aa)    
Predicted Functional Partners:
AKJ08_3527
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family.
 
 
 0.954
AKJ08_3528
Heavy metal RND efflux outer membrane protein, CzcC family.
 
  
 0.939
AKJ08_0512
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.827
AKJ08_1810
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.825
AKJ08_1811
Heavy metal RND efflux outer membrane protein, CzcC family.
 
    0.760
AKJ08_2727
Putative Co/Zn/Cd efflux system membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.705
AKJ08_0670
RND efflux system, membrane fusion protein CmeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.701
AKJ08_3524
Integral membrane sensor signal transduction histidine kinase.
       0.673
AKJ08_3525
Response regulator of zinc sigma-54-dependent two-component system.
       0.671
AKJ08_0513
Heavy metal RND efflux outer membrane protein, CzcC family.
 
  
 0.621
Your Current Organism:
Vulgatibacter incomptus
NCBI taxonomy Id: 1391653
Other names: Cystobacteraceae bacterium B00001, DSM 27710, NBRC 109945, V. incomptus, Vulgatibacter incomptus Yamamoto et al. 2014, strain B00001
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