STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU93662.1RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily. (207 aa)    
Predicted Functional Partners:
AKU93658.1
Regulator of chromosome condensation, RCC1.
       0.773
AKU93659.1
Type IV fimbrial biogenesis protein PilY1.
       0.773
AKU93660.1
Tryptophan synthase alpha chain.
       0.773
AKU93661.1
Hypothetical protein.
       0.773
AKU93657.1
Hypothetical protein.
       0.757
AKU98070.1
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.741
AKV02646.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.739
AKU96064.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.733
AKU94878.1
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.714
AKV02531.1
RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.698
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.