STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU94113.1Peptidase C1A papain. (494 aa)    
Predicted Functional Partners:
AKU98497.1
Phospholipase D/Transphosphatidylase precursor.
  
     0.658
AKU94112.1
Hypothetical protein.
       0.642
AKV04837.1
Hypothetical protein.
  
     0.633
AKU98509.1
Hypothetical protein.
  
     0.629
AKV00919.1
Hypothetical protein.
  
     0.561
AKU94267.1
Nudix hydrolase 3.
  
 
   0.513
AKU98805.1
PE family protein.
  
     0.512
AKV03838.1
Putative extracellular enzyme of alpha/beta hydrolase superfamily.
  
     0.505
AKU93768.1
Putative secreted sialidase.
  
     0.501
AKU95800.1
Acyltransferase, putative.
  
     0.480
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.