STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU94133.1Metallopeptidase. (120 aa)    
Predicted Functional Partners:
AKU99152.1
Hypothetical protein.
 
    0.756
AKV04660.1
Peptidyl-dipeptidase A precursor.
  
   
 0.670
AKU99011.1
Phosphatidylinositol transfer protein, membrane-associated 2.
  
     0.664
AKU98805.1
PE family protein.
 
    0.620
AKU99235.1
Hypothetical protein.
 
    0.557
AKV01468.1
Huntingtin interacting protein E-like protein.
  
     0.540
AKU94134.1
Cellulase.
       0.536
AKU99175.1
PE-PGRS family protein.
 
    0.517
AKU94885.1
Hypothetical protein.
  
     0.501
AKV04432.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.