STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU94600.1Hypothetical protein. (520 aa)    
Predicted Functional Partners:
AKU96850.1
Beta-lactamase.
    
  0.904
AKV01124.1
Penicillin acylase II.
     
  0.900
AKU94599.1
Dolichyl-phosphate mannose synthase.
 
     0.896
AKV03582.1
Hypothetical protein.
 
     0.790
AKU94601.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
       0.788
AKU95892.1
Membrane protein, exporter.
 
     0.777
AKV01770.1
Acyl carrier protein.
 
     0.758
AKV02423.1
Lipid A biosynthesis lauroyl acyltransferase.
  
     0.746
AKU98629.1
FAD-binding protein.
 
     0.684
AKV01042.1
Hypothetical protein.
 
     0.679
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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