STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU94837.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
AKU94838.1
Signal transduction histidine kinase CheA.
       0.773
AKU94839.1
Hypothetical protein.
       0.773
AKU94840.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
  
    0.703
AKU94836.1
Hypothetical protein.
       0.568
AKU97961.1
Signal transduction histidine kinase CheA.
 
  
 0.496
AKV02844.1
Putative SigmaB asociated two-component system sensor protein.
  
  
 0.475
AKU93819.1
Signal transduction histidine kinase CheA.
 
  
 0.458
AKU95167.1
Signal transduction histidine kinase CheA.
 
     0.442
AKV02679.1
Signal transduction histidine kinase CheA.
 
     0.434
AKU99134.1
Signal transduction histidine kinase CheA.
 
     0.431
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.