STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU95667.1Transcriptional regulator, TetR family. (234 aa)    
Predicted Functional Partners:
AKU95666.1
PhnB protein.
 
     0.850
AKU95668.1
Oxidoreductase.
       0.668
AKV04258.1
Transcriptional regulator, TetR family.
  
     0.544
AKU95809.1
Keratin associated protein.
  
     0.538
AKU94024.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.501
AKU99593.1
Transcriptional regulator, TetR family.
  
     0.477
AKU99995.1
TPR domain protein, putative component of TonB system.
  
     0.474
AKV00991.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.455
AKU98464.1
Short chain oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.448
AKU95055.1
Transcriptional regulator, MerR family.
  
     0.446
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.