STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU95890.1Soluble lytic murein transglycosylase precursor. (749 aa)    
Predicted Functional Partners:
AKU95888.1
ABC1 family protein.
 
     0.806
AKU95889.1
Type III restriction-modification system methylation subunit; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.799
AKU95891.1
Magnesium and cobalt efflux protein CorC.
       0.621
AKU95892.1
Membrane protein, exporter.
       0.613
AKU94728.1
Flagellar hook-associated protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.588
fliE
Hypothetical protein.
  
  
 0.587
AKU94713.1
Flagellar hook protein FlgE.
  
  
 0.553
AKU94709.1
Flagellum-specific ATP synthase FliI.
  
  
 0.543
AKU99728.1
Flagellum-specific ATP synthase FliI.
  
  
 0.543
AKU94715.1
Hypothetical protein.
  
    0.539
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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