STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU96109.1WD-repeat protein. (523 aa)    
Predicted Functional Partners:
AKV04069.1
Hypothetical protein.
    
 0.846
AKV04583.1
Ankyrin.
  
 0.786
AKU96708.1
TPR domain protein, putative component of TonB system.
 
 
 0.785
AKU94222.1
Putative TolA protein.
 
 
 0.754
AKU96315.1
Alanyl-tRNA synthetase family protein.
  
 0.727
AKU98914.1
Hypothetical protein.
 
 
 0.666
AKV00789.1
Hypothetical protein.
  
 
   0.666
AKV01095.1
TPR domain protein, putative component of TonB system.
  
 
 0.666
AKV03538.1
Hypothetical protein.
  
     0.663
AKV01668.1
Hypothetical protein.
  
     0.660
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.