STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU96280.1Dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (284 aa)    
Predicted Functional Partners:
AKU96281.1
Deacetylase.
       0.613
AKU96279.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.537
AKU95521.1
Oxidoreductase.
  
 
   0.519
AKU97756.1
Oxidoreductase, short-chain dehydrogenase/reductase family.
  
 
   0.503
AKU93833.1
Putative short-chain type dehydrogenase/reductase.
  
 
   0.486
AKU98418.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
   0.479
AKU96282.1
Hypothetical protein.
       0.469
AKV01996.1
Short chain dehydrogenase.
  
 
   0.466
AKU97904.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
   0.421
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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