STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU96308.1Putative acetyltransferase. (204 aa)    
Predicted Functional Partners:
AKU96301.1
Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.990
AKU96306.1
TPR repeat protein.
       0.776
AKU96307.1
Citronellol and citronellal dehydrogenase.
       0.773
AKU96302.1
Myo-inositol 2-dehydrogenase.
 
  
 0.728
AKU96309.1
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.728
AKU97462.1
UDP-galactopyranose mutase.
  
    0.694
AKV01164.1
Lipopolysaccharide biosynthesis protein RffA; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.689
AKV01145.1
Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.652
AKU98109.1
Acetyltransferase.
  
     0.602
AKU99852.1
Maltose O-acetyltransferase.
 
  
 0.549
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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