STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU96490.1Transport ATP-binding protein CydCD. (602 aa)    
Predicted Functional Partners:
AKU96774.1
ABC transporter ATP-binding protein.
 
 0.660
AKU94312.1
Long-chain-fatty-acid CoA ligase.
  
 
 0.648
AKV02656.1
ABC transporter ATP-binding protein.
 
 
 
 0.600
AKV02739.1
Chaperone protein DnaK.
  
 0.576
AKU96491.1
Dihydroxyacetone kinase, ATP-dependent.
   
   0.561
AKV04653.1
Chaperone protein DnaK.
  
 0.561
AKU97679.1
Chaperone protein DnaK; Belongs to the heat shock protein 70 family.
  
 0.540
thrS
Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 
 0.534
AKU96489.1
Thiol:disulfide oxidoreductase related to ResA.
  
    0.533
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.521
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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