STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU96711.1Two-component hybrid sensor and regulator. (156 aa)    
Predicted Functional Partners:
AKU93828.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
0.889
AKV00514.1
Sensory box histidine kinase.
 
 0.842
AKU98674.1
Chemotaxis protein methyltransferase CheR.
 
   0.832
AKU98553.1
Phosphate regulon sensor protein PhoR (SphS).
 
   0.827
AKU94185.1
Sensory box histidine kinase/response regulator.
 
   0.823
AKV01058.1
Osmosensitive K+ channel histidine kinase KdpD.
 
   0.814
AKV03212.1
Sensory box histidine kinase.
 
   0.810
AKU95928.1
Sensor histidine kinase.
  
   0.801
AKV02836.1
Hypothetical protein.
   0.800
AKV03288.1
Two-component hybrid sensor and regulator.
   0.794
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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