STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU97356.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
AKU97355.1
Hypothetical protein.
 
     0.946
AKV01061.1
Alkaline phosphatase.
 
     0.782
cpoB
TPR repeat containing exported protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
  
 0.621
AKU97357.1
Hypothetical protein.
       0.528
AKV03704.1
Hypothetical protein.
  
     0.477
AKU97062.1
Hypothetical protein.
  
     0.465
AKV03900.1
Tryptophan synthase alpha chain.
 
 
   0.458
AKV01575.1
TonB family protein / TonB-dependent receptor.
 
 
 
 0.456
AKU96454.1
TPR domain protein, putative component of TonB system.
 
    0.453
AKV02388.1
Putative alpha/beta hydrolase.
  
     0.449
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.