STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU97653.1Nitrogen regulation protein NtrY. (614 aa)    
Predicted Functional Partners:
AKV02353.1
Response regulator of zinc sigma-54-dependent two-component system.
 0.957
AKU96873.1
Nitrogen regulation protein NtrY.
  
  
 
0.927
AKU95044.1
Sensor histidine kinase.
  
  
 
0.915
AKU97104.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
  
 
 
 0.786
AKU95883.1
Putative two-component system response regulator.
  
 
 
 0.785
AKU97113.1
Response regulator.
  
 
   0.772
AKU99380.1
Response regulator receiver protein.
  
 
   0.769
AKV04228.1
Flagellar regulatory protein FleQ.
 
 
 
 0.765
AKV04088.1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
  
 
 
 0.762
AKU99135.1
Response regulator.
  
 
 
 0.758
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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