STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU97918.1ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase. (374 aa)    
Predicted Functional Partners:
AKU96582.1
Alkylated DNA repair protein AlkB.
  
 0.744
AKU98810.1
Methylated-DNA--protein-cysteine methyltransferase.
 
  
0.724
AKU97913.1
Hypothetical protein.
     0.704
AKU97915.1
Hypothetical protein.
     0.687
AKU94303.1
ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase.
 
  
0.679
AKU97920.1
DNA-3-methyladenine glycosylase II.
 
  
 0.668
AKU96969.1
ADA regulatory protein.
  
  
0.664
AKU96581.1
Hypothetical protein.
     0.639
AKU94273.1
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
   0.564
AKU94911.1
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
   0.564
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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