STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU98698.1PPOD2 peroxidase-like. (278 aa)    
Predicted Functional Partners:
AKU94512.1
Putative outer membrane protein.
  
     0.710
AKV03820.1
Tryptophan synthase alpha chain.
  
     0.614
AKU98697.1
Hypothetical protein.
       0.581
AKU98699.1
Hypothetical protein.
 
     0.568
AKV00464.1
Cytochrome c family protein.
  
     0.532
AKU97580.1
Hypothetical protein.
  
     0.513
AKU99886.1
Chemotaxis protein CheY.
  
     0.473
AKV00408.1
Hypothetical protein.
  
     0.430
AKV00472.1
Hypothetical protein.
  
     0.430
AKU93712.1
Iron-sulfur cluster-binding protein.
  
     0.427
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.