STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU99995.1TPR domain protein, putative component of TonB system. (3801 aa)    
Predicted Functional Partners:
AKU96744.1
PBS lyase HEAT domain protein repeat-containing protein.
 
 
 0.827
AKU96941.1
FHA domain protein.
 
   0.789
AKU99982.1
Putative abductin-like protein.
 
   0.789
AKV03058.1
FHA domain containing protein.
 
   0.779
AKU97121.1
Hypothetical protein.
 
   
 0.778
AKV03838.1
Putative extracellular enzyme of alpha/beta hydrolase superfamily.
  
     0.773
AKV02217.1
Hypothetical protein.
 
 
 
 0.772
AKU99633.1
Hypothetical protein.
  
     0.769
AKU97536.1
FHA domain protein.
 
   0.768
AKU99369.1
Membrane protein involved in aromatic hydrocarbon degradation.
  
     0.767
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.