STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV00177.1Putative aldose-1-epimerase. (312 aa)    
Predicted Functional Partners:
AKU97155.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.920
AKV01886.1
Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.910
AKV00178.1
Hypothetical protein.
  
    0.746
AKU93740.1
Putative oxidoreductase.
 
  
 0.564
AKV04843.1
D-alanyl-D-alanine carboxypeptidase.
  
    0.531
AKU94224.1
Mannose-6-phosphate isomerase.
 
   
 0.436
AKU93967.1
Putative phosphatase YieH.
 
  
 0.434
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
     0.434
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.