STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV00331.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
AKV00330.1
Transcriptional regulator, ArsR family.
 
    0.940
AKV00332.1
Gfa-like protein.
       0.685
AKV00329.1
Hypothetical protein.
       0.682
AKU99853.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
     0.600
AKV04594.1
Transcriptional regulator, ArsR family.
 
    0.531
AKV00041.1
Hypothetical protein.
  
     0.523
AKV04443.1
Glutathione S-transferase.
  
     0.516
AKV00328.1
N-glycosidase F, putative.
       0.490
AKU94110.1
Transcriptional regulator, TetR family.
  
     0.437
AKV03702.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.