STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV00371.1Radical SAM domain protein. (542 aa)    
Predicted Functional Partners:
AKV00372.1
Hypothetical protein.
       0.773
AKU97374.1
Tryptophanase.
  
     0.767
AKV02792.1
BchE/P-methylase family protein.
 
     0.752
AKU93953.1
Putative electron transfer oxidoreductase.
 
  
 0.564
AKU99048.1
RsbR, positive regulator of sigma-B.
  
  
 0.555
AKU99105.1
Hypothetical protein.
  
  
 0.547
AKV04206.1
Hypothetical protein.
  
  
 0.547
AKV00370.1
DNA helicase.
       0.518
AKU95420.1
UDP-galactose-lipid carrier transferase.
   
    0.493
AKU96578.1
UDP-galactose-lipid carrier transferase.
   
    0.493
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.