STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV00544.1Outer membrane protein. (482 aa)    
Predicted Functional Partners:
AKV03886.1
PAP2 superfamily protein.
  
     0.741
AKV03327.1
PAP2 superfamily protein.
  
     0.735
AKU94195.1
Multiple EGF-like-domain protein 3 precursor.
  
     0.725
AKU98820.1
Putative membrane protein.
  
     0.711
AKV04815.1
Hypothetical protein.
  
     0.678
AKV03792.1
Lanthionine biosynthesis protein LanB.
  
     0.631
AKU98278.1
Putative integral membrane protein.
  
     0.624
AKV03382.1
Hypothetical protein.
  
     0.612
AKU97927.1
Hypothetical protein.
  
     0.561
AKV01268.1
Hypothetical protein.
  
     0.558
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.