STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV00612.1Ferredoxin reductase. (520 aa)    
Predicted Functional Partners:
AKV00035.1
Uroporphyrinogen-III methyltransferase.
  
  
 0.924
AKV00242.1
Urea ABC transporter, substrate binding protein UrtA.
  
  
 0.815
AKU93926.1
Radical SAM, Pyruvate-formate lyase-activating enzyme like protein.
  
  
 0.804
AKU93467.1
Siroheme synthase / Precorrin-2 oxidase.
 
  
 0.787
AKU94952.1
Ferredoxin reductase.
 
 
0.756
rpmE
LSU ribosomal protein L31p; Binds the 23S rRNA.
  
    0.736
AKV00028.1
Riboflavin synthase eukaryotic.
   
  
 0.734
AKV02920.1
Flavohemoprotein.
  
  
 0.722
AKU94378.1
Toluene-4-monooxygenase, subunit TmoC.
  
 
 0.696
AKU94979.1
Hypothetical protein.
  
 
 0.696
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.