STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV00681.1Transcriptional regulator, TetR family. (196 aa)    
Predicted Functional Partners:
AKV00680.1
Hypothetical protein.
 
     0.803
AKV04258.1
Transcriptional regulator, TetR family.
  
     0.647
AKV00262.1
Putative dyhydroflavanol-4-reductase.
  
     0.585
AKV04259.1
NAD-dependent epimerase/dehydratase.
  
     0.522
AKU97860.1
Signal transduction response regulator / Tetratricopeptide repeat-containing protein.
  
   
 0.517
AKU97883.1
Transcriptional regulator.
  
   
 0.461
AKV00367.1
Transcriptional regulator, MarR family.
  
     0.453
AKU98878.1
Lipase-like protein.
  
     0.449
AKU96726.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
     0.413
AKU94803.1
Signal transduction response regulator / Tetratricopeptide repeat-containing protein.
  
     0.410
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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