STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV01166.1Alpha-1,3-N-acetylgalactosamine transferase PglA. (387 aa)    
Predicted Functional Partners:
AKV01161.1
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
  
 0.961
AKV01164.1
Lipopolysaccharide biosynthesis protein RffA; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.773
AKV01165.1
UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.765
AKU98429.1
Glycosyltransferase.
 
     0.756
AKV01821.1
Glycosyltransferase.
  
     0.741
AKU98453.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.678
AKV01163.1
4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase.
 
  
 0.669
AKV01570.1
Glycosyltransferase.
  
     0.636
AKU93717.1
UDP-glucose 4-epimerase.
 
    0.616
AKU99256.1
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.614
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.