STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV01211.1TPR repeat protein. (281 aa)    
Predicted Functional Partners:
AKU96455.1
Hypothetical protein.
 
 
 0.759
AKU99450.1
Hypothetical protein.
 
     0.683
AKV01227.1
TPR repeat protein.
 
     0.665
AKV03060.1
TPR domain protein, putative component of TonB system.
 
     0.624
AKU93486.1
TPR repeat-containing protein.
 
 
 0.620
AKV02107.1
TPR domain protein, putative component of TonB system.
 
     0.599
AKV01209.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
   0.588
AKU98914.1
Hypothetical protein.
 
 
 0.582
AKV01210.1
3-hydroxybutyryl-CoA dehydrogenase.
       0.569
AKV04583.1
Ankyrin.
 
 
 0.559
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.