STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV01227.1TPR repeat protein. (393 aa)    
Predicted Functional Partners:
AKV01226.1
Hypothetical protein.
       0.773
AKV02895.1
TPR domain protein, putative component of TonB system.
 
     0.762
AKV01225.1
SpoVR-like protein.
       0.746
AKU93486.1
TPR repeat-containing protein.
 
     0.734
AKV01728.1
TPR repeat protein.
 
     0.723
AKV03060.1
TPR domain protein, putative component of TonB system.
  
     0.687
AKV01211.1
TPR repeat protein.
 
     0.665
AKV03581.1
TPR repeat protein.
 
     0.659
AKV01224.1
Hypothetical protein.
       0.528
AKU96744.1
PBS lyase HEAT domain protein repeat-containing protein.
 
     0.446
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.