STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV01280.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
AKV01308.1
Chaperone protein DnaK.
  
     0.649
AKV02000.1
Hypothetical protein.
  
     0.577
AKV03846.1
Fatty acid desaturase family protein.
  
     0.543
AKU98659.1
Chromosome partition protein smc.
  
     0.498
AKV02834.1
Response regulator receiver domain protein.
  
     0.488
AKU96454.1
TPR domain protein, putative component of TonB system.
  
     0.485
AKU99240.1
Hypothetical protein.
  
     0.472
AKU93886.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.444
AKU95566.1
Bacterial Ig-like domain (Group 1) /fibronectin type III domain protein.
  
     0.444
AKV01279.1
Transcriptional regulator, TetR family.
       0.444
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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