STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV01604.1Twitching motility protein PilT. (362 aa)    
Predicted Functional Partners:
AKU99566.1
Type IV fimbrial assembly protein PilC.
 
  
 0.859
AKU96421.1
Leader peptidase (Prepilin peptidase); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.822
AKU94547.1
Type IV pilus biogenesis protein PilM.
 
   
 0.814
AKV01295.1
General secretion pathway protein F.
 
  
 0.800
AKV01603.1
Hypothetical protein.
       0.689
AKU94532.1
Type IV pilus biogenesis protein PilQ.
 
   
 0.601
AKV01605.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
       0.520
AKV01602.1
Hypothetical protein.
       0.502
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.