STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV01633.1Diphosphomevalonate decarboxylase. (329 aa)    
Predicted Functional Partners:
AKV01632.1
Mevalonate kinase.
 
  
 0.991
AKV01634.1
Phosphomevalonate kinase.
 
  
 0.991
AKV01631.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.988
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.986
AKV01635.1
Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.
 
  
 0.970
AKU93487.1
Hydroxymethylglutaryl-CoA synthase.
 
 
 0.937
AKV02741.1
Squalene--hopene cyclase.
  
 
 0.657
AKV01495.1
Membrane protein, putative.
   
 
 0.656
AKU98524.1
Uridine kinase.
  
   
 0.499
AKV02934.1
Octaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.486
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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