STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02150.1Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (411 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.998
AKU94119.1
Formiminoglutamic iminohydrolase.
 
 
 0.974
hutH
Histidine ammonia-lyase.
 
  
 0.974
AKV02419.1
N-formylglutamate deformylase.
  
  
 0.798
AKV02151.1
Beta-hexosaminidase.
       0.789
AKV04152.1
Agmatinase; Belongs to the arginase family.
  
  
 0.569
AKU96967.1
Hypothetical protein.
 
   
 0.543
AKU99691.1
Guanidinobutyrase; Belongs to the arginase family.
 
  
 0.539
AKV02152.1
Hypothetical protein.
       0.475
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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