STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02218.1Polysaccharide deacetylase. (306 aa)    
Predicted Functional Partners:
AKV03660.1
Hypothetical protein.
 
    0.785
AKU97323.1
Hypothetical protein.
 
    0.761
AKV04243.1
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase.
 
    0.749
AKV01726.1
Hypothetical protein.
  
     0.725
AKV01732.1
Putative abductin-like protein.
  
     0.705
AKV01301.1
Hypothetical protein.
  
     0.700
AKV01718.1
Hypothetical protein.
 
    0.700
AKV01139.1
O-antigen polymerase family protein.
  
     0.692
AKU99678.1
Abortive infection protein.
 
     0.672
AKV03573.1
Cytochrome c family protein.
  
     0.664
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.