STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02280.1Hypothetical protein. (382 aa)    
Predicted Functional Partners:
AKV02281.1
Hypothetical protein.
       0.773
AKV02282.1
Hypothetical protein.
       0.773
AKV03838.1
Putative extracellular enzyme of alpha/beta hydrolase superfamily.
  
     0.770
AKU95241.1
TPR domain protein.
  
     0.764
AKV02217.1
Hypothetical protein.
  
     0.762
AKV00360.1
Outer membrane efflux protein.
  
     0.756
AKU99995.1
TPR domain protein, putative component of TonB system.
  
     0.742
AKV04837.1
Hypothetical protein.
  
     0.739
AKV03029.1
Cytochrome c family protein.
  
     0.729
AKU94480.1
Hypothetical protein.
  
     0.721
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.