STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02314.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
AKU96833.1
Transcriptional regulator, TrmB family.
   
    0.690
AKV02315.1
Hypothetical protein.
       0.612
AKU97516.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
   
    0.537
AKU97698.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit.
   
    0.537
AKV01865.1
Formate dehydrogenase O beta subunit.
   
    0.537
AKV02313.1
Hypothetical protein.
       0.508
AKV04339.1
Type I restriction-modification system, restriction subunit R.
  
  
 0.462
AKU98061.1
Putative secreted protein.
  
     0.447
AKV03831.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
  
 0.427
AKV04341.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
  
 0.427
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.