STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02468.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
AKV02467.1
Hypothetical protein.
       0.773
AKV02469.1
Hypothetical protein.
       0.773
AKV03088.1
Hypothetical protein.
  
     0.657
AKU99813.1
ABC transporter ATP-binding protein.
 
    0.630
AKU99992.1
TPR domain protein, putative component of TonB system.
 
     0.628
AKV02049.1
TPR domain protein, putative component of TonB system.
 
    0.614
AKV04029.1
TPR domain protein.
 
    0.610
AKU96744.1
PBS lyase HEAT domain protein repeat-containing protein.
 
    0.608
AKV01832.1
Exonuclease SbcC.
  
     0.581
AKU94546.1
Type IV pilus biogenesis protein PilN.
 
     0.573
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.