STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02500.1Outer membrane protein. (369 aa)    
Predicted Functional Partners:
AKU97672.1
Hypothetical protein.
  
     0.751
AKU98738.1
Peptidase C14 caspase catalytic subunit p20.
  
     0.744
AKU96063.1
Hypothetical protein.
  
     0.737
AKU96708.1
TPR domain protein, putative component of TonB system.
 
   
 0.732
AKV03538.1
Hypothetical protein.
  
     0.727
AKU97689.1
Exonuclease SbcC.
 
   
 0.725
AKU99658.1
Hypothetical protein.
  
     0.720
AKV01959.1
Serine/threonine protein kinase.
  
     0.718
AKU96275.1
Hypothetical protein.
  
     0.716
AKU98409.1
Type IV fimbrial biogenesis protein PilY1.
  
     0.712
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.