STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV02587.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
AKV02484.1
Hypothetical protein.
  
 
 0.855
AKV02588.1
ABC transporter, ATP-binding protein.
     
 0.792
AKU94677.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.778
AKV02586.1
Hypothetical protein.
       0.608
AKV02585.1
Hypothetical protein.
       0.588
AKU94715.1
Hypothetical protein.
    
   0.471
AKU96198.1
Outer membrane protein assembly factor YaeT precursor.
   
  
 0.458
AKV02112.1
Outer membrane protein assembly factor YaeT precursor.
   
  
 0.458
AKV02584.1
Hypothetical protein.
       0.445
AKU97247.1
tolB protein precursor.
  
  
 0.405
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.