STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV03878.1BatD. (627 aa)    
Predicted Functional Partners:
AKV03873.1
Hypothetical protein.
 
  
 0.969
AKV03874.1
Hypothetical protein.
 
     0.957
AKV03876.1
BatB.
 
   
 0.955
AKV03875.1
BatA (aerotolerance operon).
 
   
 0.938
AKV03879.1
Hypothetical protein.
  
    0.808
AKV03877.1
Hypothetical protein.
       0.789
AKV03872.1
MoxR-like ATPase in aerotolerance operon.
 
  
 0.767
AKV01726.1
Hypothetical protein.
 
    0.732
AKV01732.1
Putative abductin-like protein.
  
     0.707
AKU97128.1
Hypothetical protein.
  
     0.704
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.