STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV03949.12-heptaprenyl-1,4-naphthoquinone methyltransferase. (274 aa)    
Predicted Functional Partners:
AKV03948.1
Transcriptional regulator, TetR family.
 
 
   0.812
AKV03947.1
Hypothetical protein.
       0.664
AKV03950.1
Transcriptional regulator, MarR family.
 
     0.575
AKV02941.1
2-heptaprenyl-1,4-naphthoquinone methyltransferase.
  
     0.530
AKV03946.1
Hypothetical protein.
       0.493
AKV03945.1
Hypothetical protein.
       0.457
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.443
AKU94807.1
Methyltransferase type 11.
  
     0.408
AKU99904.1
Methyltransferase type 11.
  
     0.406
AKU97068.1
Hypothetical protein.
 
 
 0.402
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.