STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV04009.1Hypothetical protein. (125 aa)    
Predicted Functional Partners:
AKV04010.1
Hypothetical protein.
       0.572
AKV00224.1
leucyl-tRNA synthetase.
 
     0.566
AKV04815.1
Hypothetical protein.
  
 
   0.550
AKV00537.1
PhnB protein.
 
     0.529
AKV04353.1
Dihydrofolate reductase.
  
    0.524
AKV00534.1
Histone protein.
 
     0.516
AKV00106.1
Dihydrofolate reductase.
  
    0.507
AKU97890.1
PhnB protein.
 
     0.506
AKV04489.1
Dihydrofolate reductase.
  
    0.506
AKV03382.1
Hypothetical protein.
  
 
   0.498
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.