STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV04272.1Nitrite-sensitive transcriptional repressor NsrR. (160 aa)    
Predicted Functional Partners:
AKV04273.1
Putative hemeoglobin; Belongs to the globin family.
 
   
 0.737
AKU99207.1
Iron-sulfur cluster assembly scaffold protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
  
 0.625
AKU97936.1
Cytochrome c oxidase subunit CcoN.
  
  
 0.619
AKV02920.1
Flavohemoprotein.
 
  
 0.611
iscS
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.
  
  
 0.604
AKV01880.1
Cysteine desulfurase.
  
  
 0.604
AKV04466.1
Cysteine desulfurase.
  
  
 0.604
AKV00528.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.595
AKU98545.1
Cytochrome c oxidase subunit CcoN.
  
  
 0.569
AKU95147.1
Putative monothiol glutaredoxin ycf64-like.
  
  
 0.524
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.