STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV04448.1Putative metal chaperone, involved in Zn homeostasis. (445 aa)    
Predicted Functional Partners:
AKV04447.1
High-affnity carbon uptake protein Hat/HatR.
 
   
 0.904
AKU93538.1
SSU ribosomal protein S14p (S29e).
  
 
 0.616
AKV04449.1
Nickel transporter UreH.
     
 0.579
rpmB
LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.567
AKU97739.1
C4-type zinc finger protein, DksA/TraR family.
 
  
 0.516
AKU98723.1
C4-type zinc finger protein, DksA/TraR family.
  
  
 0.445
AKU99422.1
C4-type zinc finger protein, DksA/TraR family.
  
  
 0.445
hisI
Phosphoribosyl-AMP cyclohydrolase; In the N-terminal section; belongs to the PRA-CH family.
     
 0.432
AKU97946.1
C4-type zinc finger protein, DksA/TraR family.
  
  
 0.423
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.