STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKV04528.1Zinc protease. (513 aa)    
Predicted Functional Partners:
AKV04527.1
Zinc protease.
  
0.989
AKU94315.1
Zinc protease.
  
0.954
AKV02808.1
Zinc protease.
  
0.954
AKV02095.1
Protease, insulinase family/protease, insulinase family.
  
0.953
AKV02555.1
Protease precursor.
  
0.952
AKU98944.1
Menaquinone-cytochrome C reductase iron-sulfur subunit.
   
 0.841
AKV02029.1
NADH-ubiquinone oxidoreductase chain F.
   
 
 0.772
AKV02506.1
NADH-ubiquinone oxidoreductase chain G.
   
 
 0.744
AKV02030.1
NADH-ubiquinone oxidoreductase chain E.
   
 
 0.704
nuoD
NADH-ubiquinone oxidoreductase chain D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.682
Your Current Organism:
Labilithrix luteola
NCBI taxonomy Id: 1391654
Other names: DSM 27648, L. luteola, Labilithrix luteola Yamamoto et al. 2014, NBRC 109946, Sorangiineae bacterium B00002, strain B00002
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