STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
O988_05522MSP domain-containing protein. (303 aa)    
Predicted Functional Partners:
O988_01176
Uncharacterized protein; Belongs to the OSBP family.
    
 0.996
O988_06120
Uncharacterized protein.
   
 0.892
O988_06224
Uncharacterized protein.
   
 0.771
O988_00593
t-SNARE coiled-coil homology domain-containing protein.
    
 0.766
O988_03460
V-SNARE coiled-coil homology domain-containing protein.
    
 0.756
O988_07260
Uncharacterized protein.
    
 
 0.755
O988_06548
t-SNARE coiled-coil homology domain-containing protein.
    
 0.753
O988_02963
t-SNARE coiled-coil homology domain-containing protein.
    
 0.753
O988_01871
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
    
 0.752
O988_05241
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.751
Your Current Organism:
Pseudogymnoascus sp. VKMF3808
NCBI taxonomy Id: 1391699
Other names: P. sp. VKM F-3808, Pseudogymnoascus sp. VKM F-3808
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.