STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
O988_01796Zn(2)-C6 fungal-type domain-containing protein. (753 aa)    
Predicted Functional Partners:
O988_00924
Uncharacterized protein.
    
 0.835
O988_00160
Uncharacterized protein.
    
  0.765
O988_02954
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.765
O988_03827
Uncharacterized protein.
    
  0.620
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.620
O988_03963
Ribosomal_S10 domain-containing protein.
    
  0.617
O988_08543
Uncharacterized protein.
    
  0.615
O988_08170
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.615
O988_04524
Uncharacterized protein.
    
  0.615
O988_04918
Uncharacterized protein.
    
  0.614
Your Current Organism:
Pseudogymnoascus sp. VKMF3808
NCBI taxonomy Id: 1391699
Other names: P. sp. VKM F-3808, Pseudogymnoascus sp. VKM F-3808
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.