STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
O988_00974Uncharacterized protein. (245 aa)    
Predicted Functional Partners:
O988_02541
Uncharacterized protein.
    
 0.663
O988_01098
Uncharacterized protein.
   
   0.662
O988_08896
CHCH domain-containing protein.
   
   0.657
O988_01002
Uncharacterized protein.
   
   0.654
O988_08920
Uncharacterized protein.
    
 0.646
O988_07509
DNA polymerase.
   
 0.645
O988_07833
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.636
O988_07263
Uncharacterized protein.
   
   0.627
O988_09797
Uncharacterized protein.
   
   0.626
O988_02270
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
   0.626
Your Current Organism:
Pseudogymnoascus sp. VKMF3808
NCBI taxonomy Id: 1391699
Other names: P. sp. VKM F-3808, Pseudogymnoascus sp. VKM F-3808
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.