STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
O988_07689Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
O988_00924
Uncharacterized protein.
   
 0.890
O988_02915
Protein kinase domain-containing protein.
    
  0.632
O988_09060
ANK_REP_REGION domain-containing protein.
   
  0.621
O988_00562
ANK_REP_REGION domain-containing protein.
   
  0.621
O988_01545
Uncharacterized protein.
   
  0.603
O988_04024
Integrase catalytic domain-containing protein.
    
  0.587
O988_06488
ANK_REP_REGION domain-containing protein.
   
  0.564
O988_00450
Uncharacterized protein.
    
  0.546
O988_04440
MRG domain-containing protein.
    
  0.517
O988_01036
Uncharacterized protein.
    
  0.499
Your Current Organism:
Pseudogymnoascus sp. VKMF3808
NCBI taxonomy Id: 1391699
Other names: P. sp. VKM F-3808, Pseudogymnoascus sp. VKM F-3808
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.