STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAD57834.1Ribonuclease BN. (421 aa)    
Predicted Functional Partners:
GAD59192.1
Signal transduction histidine kinase.
  
     0.627
GAD60299.1
Sensor histidine kinase, putative.
  
     0.585
GAD59721.1
Hypothetical protein.
  
     0.582
prmC
Methylase of polypeptide chain release factors; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.563
GAD59707.1
Phospholipase D/Transphosphatidylase.
 
    0.543
GAD59720.1
cheY-like receiver.
  
     0.514
GAD60437.1
Hypothetical protein.
  
     0.506
GAD58364.1
Hypothetical protein.
 
    0.454
GAD57829.1
General stress protein.
 
    0.453
GAD58996.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Brevundimonas abyssalis
NCBI taxonomy Id: 1391729
Other names: B. abyssalis TAR-001, Brevundimonas abyssalis TAR-001, Brevundimonas sp. TAR-001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.